Incorporating measures of data quality into plant-pollinator databases
DOI:
https://doi.org/10.26786/1920-7603(2025)844Keywords:
agriculture, bees, pollination, species interactions, flowers, insectsAbstract
The development of large databases of plant-pollinator relationships poses both great opportunities and a particular problem for scientists and practitioners interested in these interactions. A major issue is that it is rare for measures of data quality to be included, in the sense of stating the evidence by which animal X has been determined to be a pollinator of plant Y. Adding such information to databases is vital if we are to fully understand the plant-pollinator relationships that they describe and address information gaps. We present some examples of data quality schemas that have been used in the past and then adopted by the Pollinators of Apocynaceae Database and the Database of Pollinator Interactions (DoPI), and how the forthcoming USDA-NRCS PLANTS database has tackled this question. In addition, we discuss the use of controlled vocabularies developed by the Brazilian Network of Plant-Pollinator Interactions (REBIPP), allied to a vocabulary based on the Darwin Core standard. It is our hope that the pollination ecology community will see the importance of these or other evaluations of data quality and adopt them accordingly.
References
Adams PB, Lawson SD (1993) Pollination in Australian orchids: a critical assessment of the literature 1882–1992. Australian Journal of Botany 41:553–575. DOI: https://doi.org/10.1071/BT9930553
Allen-Perkins A, Magrach A, Dainese M, Garibaldi LA, Kleijn D, Rader R, Reilly JR, et al. (2022) CropPol: A dynamic, open and global database on crop pollination. Ecology 103(3):e3614. DOI: https://doi.org/10.1002/ecy.3614
Balfour NJ, Castellanos MC, Goulson D, Philippides A, Johnson C (2022) DoPI: The database of pollinator interactions. Ecology 103(11):e3801. DOI: https://doi.org/10.1002/ecy.3801
Biodiversity Information Standards (2023) Darwin Core Standard. [online] URL: https://dwc.tdwg.org/
Cox PA, Knox RB (1988) Pollination postulates and two-dimensional pollination in hydrophilous monocotyledons. Annals of the Missouri Botanical Garden 75:811–818. DOI: https://doi.org/10.2307/2399369
DoPI (2024) Database of Pollinator Interactions. [online] URL: https://www.sussex.ac.uk/lifesci/ebe/dopi/
Drucker D, Salim JA, Poelen J, Soares FM, Gonzalez-Vaquero RA, Ollerton J, Devoto M, Rünzel M, Robinson D, Kasina M, Taliga C, Parr CS, Cox-Foster D, Hill E, Maués MM, Saraiva AM, Agostini K, Carvalheiro LG, Bergamo PJ, Varassin I, Araujo Alves D, Marques B, Tinoco C, Rech AR, Cardona-Duque J, Idárraga M, Agudelo-Zapata MC, Marentes Herrera E, Trekels M (2024b) WorldFAIR (D10.2) Agricultural Biodiversity Standards, Best Practices and Guidelines Recommendations (Version 1). Zenodo.
Drucker DP, Salim JA, Poelen J, Soares FM, Gonzalez-Vaquero RA, Devoto M, Ollerton J, Kasina M, Carvalheiro LG, Bergamo PJ, Alves DA, Varassin I, Tinoco FC, Rünzel M, Robinson D, Cardona-Duque J, Idárraga M, Agudelo-Zapata MC, Marentes Herrera E, Taliga C, Parr CS, Cox-Foster D, Hill E, Maués MM, Agostini K, Rech AR, Saraiva A (2024a) WorldFAIR (D10.3) Agricultural biodiversity FAIR data assessment rubrics (Version 1). Zenodo.
Fortuna MA, Ortega R, Bascompte J (2014) The web of life. arXiv preprint arXiv:1403.2575.
GBIF (2023) The Global Biodiversity Information Facility [online] URL: https://www.gbif.org/new-data-model
GloBI (2023) Global Biotic Interactions [online] URL: https://www.globalbioticinteractions.org/
Gómez JM, Iriondo JM, Torres P (2023) Modeling the continua in the outcomes of biotic interactions. Ecology 104(4): e3995. DOI: https://doi.org/10.1002/ecy.3995
Herrera CM (1987) Components of pollinator "quality": comparative analysis of a diverse insect assemblage. Oikos 50: 79–90. DOI: https://doi.org/10.2307/3565403
Herrera CM (1989) Pollinator abundance, morphology, and flower visitation rate: analysis of the “quantity” component in a plant-pollinator system. Oecologia 80(2): 241–248. DOI: https://doi.org/10.1007/BF00380158
IWDB (2023) Interaction Web Database [online] URL: http://www.ecologia.ib.usp.br/iwdb/
King C, Ballantyne G, Willmer PG (2013) Why flower visitation is a poor proxy for pollination: measuring single-visit pollen deposition, with implications for pollination networks and conservation. Methods in Ecology and Evolution 4(9): 811–818. DOI: https://doi.org/10.1111/2041-210X.12074
Lanuza JB, Knight TM, Montes-Perez N, Glenny W, Acuña P, Albrecht M, Artamendi M, Badenhausser I, Bennett JM, Biella P, Bommarco R, Cappellari A, Castro S, Clough Y, Colom P, Costa J, Cyrille N, de Manincor N, Dominguez-Lapido P, Dominik C, Dupont YL, Feldmann R, Felten E, Ferrero V, Fiordaliso W, Fisogni A, Fitzpatrick Ú, Galloni M, Gaspar H, Gazzea E, Goia I, Gómez-Martínez C, González-Estévez MA, González-Varo JP, Grass I, Hadrava J, Hautekèete N, Hederström V, Heleno R, Hervias-Parejo S, Heuschele JM, Hoiss B, Holzschuh A, Hopfenmüller S, Iriondo JM, Jauker B, Jauker F, Jersáková J, Kallnik K, Karise R, Kleijn D, Klotz S, Krausl T, Kühn E, Lara-Romero C, Larkin M, Laurent E, Lázaro A, Librán-Embid F, Liu Y, Lopes S, López-Núñez F, Loureiro J, Magrach A, Mänd M, Marini L, Mas RB, Massol F, Maurer C, Michez D, Molina FP, Morente-López J, Mullen S, Nakas G, Neuenkamp L, Nowak A, O'Connor CJ, O'Rourke A, Öckinger E, Olesen JM, Opedal ØH, Petanidou T, Piquot Y, Potts SG, Power EF, Proesmans W, Rakosy D, Reverté S, Roberts SPM, Rundlöf M, Russo L, Schatz B, Scheper J, Schweiger O, Serra PE, Siopa C, Smith HG, Stanley D, Ştefan V, Steffan-Dewenter I, Stout JC, Sutter L, Švara EM, Świerszcz S, Thompson A, Traveset A, Trefflich A, Tropek R, Tscharntke T, Vanbergen AJ, Vilà M, Vujić A, White C, Wickens JB, Wickens VB, Winsa M, Zoller L, Bartomeus I (2025) EuPPollNet: A European Database of Plant-Pollinator Networks. Global Ecology and Biogeography 34: e70000. DOI: https://doi.org/10.1111/geb.70000
Ollerton J (2021) Pollinators & Pollination: Nature and Society. Pelagic Publishing, Exeter, UK DOI: https://doi.org/10.53061/JAOK9895
Ollerton J (2024) Birds & Flowers: An Intimate 50 Million Year Relationship. Pelagic Publishing, Exeter, UK DOI: https://doi.org/10.2307/jj.29126489
Ollerton J (2025a) Was this the first online database of plant-pollinator interactions? [online] URL: https://jeffollerton.co.uk/2025/01/07/was-this-the-first-online-database-of-plant-pollinator-interactions/
Ollerton J (2025b) Project ‘Butterfly’ takes flight in Paris! [online] URL: https://jeffollerton.co.uk/2025/04/07/project-butterfly-takes-flight-in-paris/
Ollerton J, Coulthard E, Tarrant S, Woolford J, Ré Jorge L, Rech AR (2024) Butterflies, bumblebees and hoverflies are equally effective pollinators of Knautia arvensis (Caprifoliaceae), a generalist plant species with compound inflorescences. Journal of Applied Entomology 149: 685-696. DOI: https://doi.org/10.1111/jen.13345
Ollerton J, Johnson SD, Cranmer L, Kellie S (2003) The pollination ecology of an assemblage of grassland asclepiads in South Africa. Annals of Botany 92: 807–834. DOI: https://doi.org/10.1093/aob/mcg206
Ollerton J, Liede S (1997) Pollination systems in the Asclepiadaceae: a survey and preliminary analysis. Biological Journal of the Linnean Society 62: 593–610 DOI: https://doi.org/10.1111/j.1095-8312.1997.tb00324.x
Ollerton J, Liede-Schumann S, Endress ME, Meve U, Rech AR, Shuttleworth A, Keller HA, Fishbein M, Alvarado-Cárdenas LO, Amorim FW, Bernhardt P, Celep F, Chirango Y, Chiriboga-Arroyo F, Civeyrel L, Cocucci A, Cranmer L, da Silva-Batista IC, de Jager L, Scaramussa Deprá M, Domingos-Melo A, Dvorsky C, Agostini K, Freitas L, Gaglianone MC, Galetto L, Gilbert M, González-Ramírez I, Gorostiague P, Goyder D, Hachuy-Filho L, Heiduk A, Howard A, Ionta G, Islas-Hernández SC, Johnson SD, Joubert L, Kaiser-Bunbury CN, Kephart S, Kidyoo A, Koptur S, Koschnitzke C, Lamborn E, Livshultz T, Machado IC, Marino S, Mema L, Mochizuki K, Morellato LPC, Mrisha CK, Muiruri EW, Nakahama N, Nascimento VT, Nuttman C, Oliveira PE, Peter CI, Punekar S, Rafferty N, Rapini A, Ren ZX, Rodríguez-Flores CI, Rosero L, Sakai S, Sazima M, Steenhuisen SL, Tan CW, Torres C, Trøjelsgaard K, Ushimaru A, Vieira MF, Wiemer AP, Yamashiro T, Nadia T, Queiroz J, Quirino Z (2019) The diversity and evolution of pollination systems in large plant clades: Apocynaceae as a case study. Annals of Botany 123: 311–325. DOI: https://doi.org/10.1093/aob/mcy127
Poelen JH, Simons JD, Mungall CJ (2014) Global Biotic Interactions: An open infrastructure to share and analyze species-interaction datasets. Ecological Informatics 24: 148–159. DOI: https://doi.org/10.1016/j.ecoinf.2014.08.005
REBIPP (2024) Rede Brasileira de Interações Planta-Polinizador [online] URL: http://db.rebipp.org.br/
Salim JA, Saraiva AM, Zermoglio PF, et al. (2022a) Data standardization of plant–pollinator interactions. GigaScience 11: giac043.
Salim JA, Seltmann KC, Poelen JH, Saraiva AM (2022b) Indexing Biotic Interactions in GBIF data. Biodiversity Information Science and Standards 6: e93565. DOI: https://doi.org/10.3897/biss.6.93565
Trekels M, Pignatari Drucker D, Salim JA, Ollerton J, Poelen J, Miranda Soares F, Rünzel M, Kasina M, Groom Q, Devoto M (2023) WorldFAIR Project (D10.1) Agriculture-related pollinator data standards use cases report (Version 1). Zenodo.
Vázquez D, Goldberg, J, Naik R. (2003) Interaction Web DataBase. [Retrieved from http://iwdb.nceas.ucsb.edu/]
Vissault S, Cazelles K, Bergeron G, Mercier B, Violet C, Gravel D, Poisot T (2020) rmangal: An R package to interact with Mangal database. R package version 2.1.3. https://docs.ropensci.org/rmangal/
Wieczorek J, Bloom D, Guralnick R, Blum S, Döring M, et al. (2012) Darwin Core: An Evolving Community-Developed Biodiversity Data Standard. PLoS ONE 7: e29715. DOI: https://doi.org/10.1371/journal.pone.0029715
Wilkinson MD, Dumontier M, Aalbersberg IJJ, Appleton G, Axton M, Baak A, Blomberg N, Boiten JW, da Silva Santos LB, Bourne PE, Bouwman J, Brookes AJ, Clark T, Crosas M, Dillo I, Dumon O, Edmunds S, Evelo CT, Finkers R, Gonzalez-Beltran A, Gray AJG, Groth P, Goble C, Grethe JS, Heringa J, ’t Hoen PAC, Hooft R, Kuhn T, Kok R, Kok J, Lusher SJ, Martone ME, Mons A, Packer AL, Persson B, Rocca-Serra P, Roos M, van Schaik R, Sansone SA, Schultes E, Sengstag T, Slater T, Strawn G, Swertz MA, Thompson M, van der Lei J, van Mulligen E, Velterop J, Waagmeester A, Wittenburg P, Wolstencroft K, Zhao J, Mons B (2016) The FAIR Guiding Principles for scientific data management and stewardship. Scientific Data 3: 160018. DOI: https://doi.org/10.1038/sdata.2016.18
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Copyright (c) 2025 Jeff Ollerton, Christine Taliga, José Augusto Salim, Jorrit H. Poelen, Debora Pignatari Drucker
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